No. words: 1029; after pruning: 1003


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   16    0.0 5.2 (1,1:485)  435  1.91 0.00 0.00  UCD021F_B04_BG605258Ta14P025C05P012H081F2_030.ab1        1   470 (27)  C UCD021R_B04_BG605258Ta14P025C05P012H081R2_030.ab1   (46)   486    17 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
16       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C UCD021R_B04_BG605258Ta14P025C05P012H081R2_030.ab1   532 
Contig length: old 543, new 532

Contig length: old 532, new 532
New start: 0