No. words: 1058; after pruning: 1032


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:475)  465  0.21 0.00 0.00  UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1        1   476 (69)  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   (37)   476     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   513 
   41    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1     4 
  112  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   402 
  144    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   107 
  156  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   358 
  160    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   123 
  168  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   346 
  224    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   187 
  228  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   286 
  308    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   271 
  312  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   202 
  332    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   295 
  364  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   150 
  380    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   343 
  388  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   126 
  392    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   355 
  400  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1   114 
  412    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   375 
  416  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1    98 
  424    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   387 
  436  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1    78 
  448    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   411 
  456  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1    58 
  460    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   423 
  464  C UCD014R_H10_BG605258Ta16P025A05P012H081R1_066.ab1    50 
  476    UCD014F_H10_BG605258Ta16P025A05P012H081F1_066.ab1   439 
Contig length: old 582, new 582

Contig length: old 582, new 582
New start: 0