No. words: 1069; after pruning: 1043


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.3 (1,1:477)  466  0.21 0.00 0.00  UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1        2   478 (80)  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1   (34)   477     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1   511 
   38    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1     5 
  110  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1   402 
  138    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   105 
  142  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1   370 
  174    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   141 
  178  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1   334 
  286    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   253 
  306  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1   206 
  366    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   333 
  370  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1   142 
  382    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   349 
  386  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1   126 
  414    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   381 
  418  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1    94 
  430    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   397 
  438  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1    74 
  450    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   417 
  454  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1    58 
  462    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   429 
  466  C UCD014R_C09_BG605258Ta19P025A05P012H081R1_075.ab1    46 
  506    UCD014F_C09_BG605258Ta19P025A05P012H081F1_075.ab1   473 
Contig length: old 591, new 591

Contig length: old 591, new 591
New start: 0