No. words: 1072; after pruning: 1046


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:490)  477  0.00 0.00 0.20  UCD021F_G04_BG605258Ta19P025C05P012H081F2_020.ab1        1   491 (44)  C UCD021R_G04_BG605258Ta19P025C05P012H081R2_020.ab1   (47)   490     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C UCD021R_G04_BG605258Ta19P025C05P012H081R2_020.ab1   537 
  447    UCD021F_G04_BG605258Ta19P025C05P012H081F2_020.ab1   400 
  451  C UCD021R_G04_BG605258Ta19P025C05P012H081R2_020.ab1    87 
  523    UCD021F_G04_BG605258Ta19P025C05P012H081F2_020.ab1   476 
Contig length: old 581, new 582

Contig length: old 582, new 582
New start: 0