No. words: 1023; after pruning: 997


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 10.2 (1,1:474)  457  0.21 0.00 0.00  UCD014F_G08_BG605258Td07P025A05P012H081F1_052.ab1        3   470 (0)  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   (80)   473     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   553 
   84    UCD014F_G08_BG605258Td07P025A05P012H081F1_052.ab1     6 
  136  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   418 
  140    UCD014F_G08_BG605258Td07P025A05P012H081F1_052.ab1    62 
  148  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   406 
  164    UCD014F_G08_BG605258Td07P025A05P012H081F1_052.ab1    86 
  168  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   386 
  180    UCD014F_G08_BG605258Td07P025A05P012H081F1_052.ab1   102 
  192  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   362 
  200    UCD014F_G08_BG605258Td07P025A05P012H081F1_052.ab1   122 
  204  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   350 
  216    UCD014F_G08_BG605258Td07P025A05P012H081F1_052.ab1   138 
  220  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   334 
  248    UCD014F_G08_BG605258Td07P025A05P012H081F1_052.ab1   170 
  256  C UCD014R_G08_BG605258Td07P025A05P012H081R1_052.ab1   298 
Contig length: old 553, new 553

Contig length: old 553, new 553
New start: 0