No. words: 1342; after pruning: 1316


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:632)  593  0.00 0.32 0.16  UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1        2   633 (38)  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   (38)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  308 nodes

 156 str. conn. components

Path
    1  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   671 
   50    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1    12 
   54  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   618 
   66    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1    27 
   86  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   586 
   94    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1    55 
  106  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   566 
  110    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1    71 
  470  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   202 
  474    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1   435 
  478  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   194 
  486    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1   447 
  494  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   178 
  502    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1   463 
  534  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   138 
  538    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1   499 
  566  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1   106 
  574    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1   535 
  606  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1    66 
  622    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1   583 
  646  C UCD027R_F04_BG608232Sn24P025A06P036B021R1_022.ab1    26 
  650    UCD027F_F04_BG608232Sn24P025A06P036B021F1_022.ab1   611 
Contig length: old 709, new 710

Contig length: old 710, new 710
New start: 0