No. words: 1137; after pruning: 1111


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     6

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:558)  524  0.18 0.18 0.18  UCW001F_F10_BE292081As02P002H04H101F1_079.ab1        1   559 (5)  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   (14)   559     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   573 
   30    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1    16 
   34  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   540 
   46    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1    32 
   54  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   520 
   74    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1    60 
   82  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   492 
  142    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1   128 
  146  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   428 
  202    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1   188 
  214  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   360 
  384    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1   369 
  392  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   182 
  412    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1   397 
  420  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   154 
  428    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1   413 
  440  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   134 
  444    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1   429 
  472  C UCW001R_F10_BE292081As02P002H04H101R1_079.ab1   102 
  480    UCW001F_F10_BE292081As02P002H04H101F1_079.ab1   465 
Contig length: old 578, new 579

Contig length: old 579, new 579
New start: 0