No. words: 1297; after pruning: 1271


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:624)  615  0.00 0.00 0.00  UCW005F_A08_BE352592As01P002D04D101F1_053.ab1        1   625 (18)  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   (29)   625     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   654 
   37    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1     8 
   41  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   614 
   45    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1    16 
   61  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   594 
   65    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1    36 
   73  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   582 
   77    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1    48 
  121  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   534 
  125    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1    96 
  141  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   514 
  149    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   120 
  157  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   498 
  161    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   132 
  173  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   482 
  185    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   156 
  189  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   466 
  193    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   164 
  201  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   454 
  205    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   176 
  233  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   422 
  237    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   208 
  257  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   398 
  261    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   232 
  265  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   390 
  269    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   240 
  333  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   322 
  357    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   328 
  381  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   274 
  413    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   384 
  429  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   226 
  433    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   404 
  437  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   218 
  477    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   448 
  481  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   174 
  485    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   456 
  501  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   154 
  521    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   492 
  549  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1   106 
  569    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   540 
  573  C UCW005R_A08_BE352592As01P002D04D101R1_053.ab1    82 
  649    UCW005F_A08_BE352592As01P002D04D101F1_053.ab1   620 
Contig length: old 672, new 672

Contig length: old 672, new 672
New start: 0