No. words: 1587; after pruning: 1547


Histogram of relative pair offsets, for read pairs with multiple alignments:
64     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.2 (1,1:761)  719  0.52 0.00 0.13  UCW004F_C08_BE399630At02P002D02D081F1_054.ab1        1   762 (26)  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   (38)   761     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   799 
   42    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1     4 
  247  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   554 
  251    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   213 
  303  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   498 
  307    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   269 
  315  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   486 
  319    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   281 
  343  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   458 
  379    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   341 
  383  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   418 
  403    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   365 
  423  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   378 
  439    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   401 
  515  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   286 
  519    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   481 
  523  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   278 
  527    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   489 
  543  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   258 
  547    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   509 
  555  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   246 
  563    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   525 
  575  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   226 
  587    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   549 
  615  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   186 
  635    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   597 
  639  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   162 
  643    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   605 
  647  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   154 
  659    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   621 
  663  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   138 
  687    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   649 
  691  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1   110 
  707    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   669 
  711  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1    90 
  759    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   721 
  763  C UCW004R_C08_BE399630At02P002D02D081R1_054.ab1    38 
  795    UCW004F_C08_BE399630At02P002D02D081F1_054.ab1   757 
Contig length: old 825, new 826

Contig length: old 826, new 826
New start: 0