No. words: 1590; after pruning: 1564


Histogram of relative pair offsets, for read pairs with multiple alignments:
89     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:815)  707  0.27 0.00 0.13  UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1       72   817 (28)  C UCW004R_A07_BE399630Ld01P002D02D081R1_049.ab1   (0)   745     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1    UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1     1 
  251  C UCW004R_A07_BE399630Ld01P002D02D081R1_049.ab1   566 
  260    UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1   260 
  348  C UCW004R_A07_BE399630Ld01P002D02D081R1_049.ab1   469 
  356    UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1   356 
  392  C UCW004R_A07_BE399630Ld01P002D02D081R1_049.ab1   425 
  400    UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1   400 
  404  C UCW004R_A07_BE399630Ld01P002D02D081R1_049.ab1   413 
  436    UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1   436 
  440  C UCW004R_A07_BE399630Ld01P002D02D081R1_049.ab1   377 
  448    UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1   448 
  476  C UCW004R_A07_BE399630Ld01P002D02D081R1_049.ab1   341 
  528    UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1   528 
  532  C UCW004R_A07_BE399630Ld01P002D02D081R1_049.ab1   285 
  810    UCW004F_A07_BE399630Ld01P002D02D081F1_049.ab1   811 
Contig length: old 845, new 844

Contig length: old 844, new 844
New start: 0