No. words: 1621; after pruning: 1595


Histogram of relative pair offsets, for read pairs with multiple alignments:
88     2
90     2
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.5 (1,1:804)  743  0.38 0.00 0.13  UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1       20   806 (29)  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   (0)   786     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1     1 
   23  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   783 
   37    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1    37 
  334  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   473 
  338    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   338 
  350  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   457 
  354    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   354 
  370  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   437 
  374    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   374 
  386  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   421 
  402    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   402 
  410  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   397 
  414    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   414 
  418  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   389 
  422    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   422 
  434  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   373 
  438    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   438 
  466  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   341 
  610    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   610 
  618  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1   189 
  766    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   766 
  790  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1    17 
  794    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   794 
  798  C UCW004R_B07_BE399630Ld02P002D02D081R1_057.ab1     9 
  802    UCW004F_B07_BE399630Ld02P002D02D081F1_057.ab1   802 
Contig length: old 835, new 835

Contig length: old 835, new 835
New start: 0