No. words: 1627; after pruning: 1601


Histogram of relative pair offsets, for read pairs with multiple alignments:
66     4
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.2 (1,1:900)  669  0.55 0.27 0.41  UCW004F_C07_BE399630Ld03P002D02D081F1_050.ab1       51   778 (0)  C UCW004R_C07_BE399630Ld03P002D02D081R1_050.ab1   (0)   849   123 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1    UCW004F_C07_BE399630Ld03P002D02D081F1_050.ab1     1 
  419  C UCW004R_C07_BE399630Ld03P002D02D081R1_050.ab1   483 
  423    UCW004F_C07_BE399630Ld03P002D02D081F1_050.ab1   423 
  439  C UCW004R_C07_BE399630Ld03P002D02D081R1_050.ab1   463 
  475    UCW004F_C07_BE399630Ld03P002D02D081F1_050.ab1   475 
  479  C UCW004R_C07_BE399630Ld03P002D02D081R1_050.ab1   423 
  499    UCW004F_C07_BE399630Ld03P002D02D081F1_050.ab1   499 
  503  C UCW004R_C07_BE399630Ld03P002D02D081R1_050.ab1   399 
Contig length: old 901, new 901

Contig length: old 901, new 901
New start: 0