No. words: 1589; after pruning: 1563


Histogram of relative pair offsets, for read pairs with multiple alignments:
65     2
67     2
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:897)  645  0.58 0.29 0.00  UCW004F_F07_BE399630Ld06P002D02D081F1_059.ab1      125   813 (0)  C UCW004R_F07_BE399630Ld06P002D02D081R1_059.ab1   (0)   776    86 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1    UCW004F_F07_BE399630Ld06P002D02D081F1_059.ab1     1 
  418  C UCW004R_F07_BE399630Ld06P002D02D081R1_059.ab1   482 
  422    UCW004F_F07_BE399630Ld06P002D02D081F1_059.ab1   422 
  462  C UCW004R_F07_BE399630Ld06P002D02D081R1_059.ab1   438 
  466    UCW004F_F07_BE399630Ld06P002D02D081F1_059.ab1   466 
  474  C UCW004R_F07_BE399630Ld06P002D02D081R1_059.ab1   426 
Contig length: old 898, new 899

Contig length: old 899, new 899
New start: 0