No. words: 1465; after pruning: 1439


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:908)  549  0.36 0.00 0.00  UCW005F_B09_BE403761Ld02P002D06D121F1_073.ab1      139   694 (0)  C UCW005R_B09_BE403761Ld02P002D06D121R1_073.ab1   (0)   771   216 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1    UCW005F_B09_BE403761Ld02P002D06D121F1_073.ab1     1 
  437  C UCW005R_B09_BE403761Ld02P002D06D121R1_073.ab1   473 
  441    UCW005F_B09_BE403761Ld02P002D06D121F1_073.ab1   441 
  477  C UCW005R_B09_BE403761Ld02P002D06D121R1_073.ab1   433 
Contig length: old 909, new 909

Contig length: old 909, new 909
New start: 0