No. words: 1688; after pruning: 1648


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.9 (1,1:910)  758  0.39 0.00 0.26  UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1       83   860 (0)  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   (0)   828    53 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1    UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1     1 
  353  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   559 
  361    UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1   361 
  381  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   531 
  385    UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1   385 
  389  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   523 
  393    UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1   393 
  401  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   511 
  421    UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1   421 
  429  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   483 
  433    UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1   433 
  437  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   475 
  441    UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1   441 
  457  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   455 
  465    UCW005F_E09_BE403761Ld05P002D06D121F1_067.ab1   465 
  473  C UCW005R_E09_BE403761Ld05P002D06D121R1_067.ab1   439 
Contig length: old 911, new 911

Contig length: old 911, new 911
New start: 0