No. words: 1632; after pruning: 1606


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:772)  769  0.00 0.00 0.00  UCW047_H03_BE403761Sn24P002D06P022C111R1_017.ab1        1   773 (33)  C UCW048_H03_BE403761Sn24P002D06P022C111F1_017.ab1   (53)   773     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1  C UCW048_H03_BE403761Sn24P002D06P022C111F1_017.ab1   826 
   57    UCW047_H03_BE403761Sn24P002D06P022C111R1_017.ab1     4 
  689  C UCW048_H03_BE403761Sn24P002D06P022C111F1_017.ab1   138 
  737    UCW047_H03_BE403761Sn24P002D06P022C111R1_017.ab1   684 
  741  C UCW048_H03_BE403761Sn24P002D06P022C111F1_017.ab1    86 
  805    UCW047_H03_BE403761Sn24P002D06P022C111R1_017.ab1   752 
Contig length: old 859, new 859

Contig length: old 859, new 859
New start: 0