No. words: 1327; after pruning: 1301


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.2 (1,1:683)  595  0.00 0.00 0.00  UCW047_G12_BE403761Sn32P002D06P022E111R1_084.ab1        1   596 (0)  C UCW048_G12_BE403761Sn32P002D06P022E111F1_084.ab1   (47)   684    89 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C UCW048_G12_BE403761Sn32P002D06P022E111F1_084.ab1   731 
  131    UCW047_G12_BE403761Sn32P002D06P022E111R1_084.ab1    84 
  135  C UCW048_G12_BE403761Sn32P002D06P022E111F1_084.ab1   597 
Contig length: old 731, new 731

Contig length: old 731, new 731
New start: 0