No. words: 1453; after pruning: 1427


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:770)  634  0.31 0.00 0.15  UCW047_H02_BE403761Ta16P002D06P022C111R1_002.ab1      126   772 (35)  C UCW048_H02_BE403761Ta16P002D06P022C111F1_002.ab1   (0)   646     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1    UCW047_H02_BE403761Ta16P002D06P022C111R1_002.ab1     1 
  518  C UCW048_H02_BE403761Ta16P002D06P022C111F1_002.ab1   254 
  530    UCW047_H02_BE403761Ta16P002D06P022C111R1_002.ab1   530 
  610  C UCW048_H02_BE403761Ta16P002D06P022C111F1_002.ab1   162 
  746    UCW047_H02_BE403761Ta16P002D06P022C111R1_002.ab1   746 
Contig length: old 807, new 807

Contig length: old 807, new 807
New start: 0