No. words: 890; after pruning: 864


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.3 (1,1:680)  202  0.96 0.00 0.00  UCW047_G10_BE403761Ta17P002D06P022E111R1_068.ab1      123   331 (0)  C UCW048_G10_BE403761Ta17P002D06P022E111F1_068.ab1   (0)   559   351 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  98 nodes

 51 str. conn. components

Path
    1    UCW047_G10_BE403761Ta17P002D06P022E111R1_068.ab1     1 
  200  C UCW048_G10_BE403761Ta17P002D06P022E111F1_068.ab1   482 
  216    UCW047_G10_BE403761Ta17P002D06P022E111R1_068.ab1   216 
  220  C UCW048_G10_BE403761Ta17P002D06P022E111F1_068.ab1   462 
Contig length: old 681, new 681

Contig length: old 681, new 681
New start: 0