No. words: 1277; after pruning: 1251


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 9.9 (1,1:761)  494  0.39 0.20 0.00  UCW047_F01_BE403761Td06P002D06P022C111R1_005.ab1      190   696 (7)  C UCW048_F01_BE403761Td06P002D06P022C111F1_005.ab1   (0)   574    67 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1    UCW047_F01_BE403761Td06P002D06P022C111R1_005.ab1     1 
  454  C UCW048_F01_BE403761Td06P002D06P022C111F1_005.ab1   309 
  458    UCW047_F01_BE403761Td06P002D06P022C111R1_005.ab1   458 
  474  C UCW048_F01_BE403761Td06P002D06P022C111F1_005.ab1   289 
  486    UCW047_F01_BE403761Td06P002D06P022C111R1_005.ab1   486 
  494  C UCW048_F01_BE403761Td06P002D06P022C111F1_005.ab1   269 
  506    UCW047_F01_BE403761Td06P002D06P022C111R1_005.ab1   506 
  510  C UCW048_F01_BE403761Td06P002D06P022C111F1_005.ab1   253 
  562    UCW047_F01_BE403761Td06P002D06P022C111R1_005.ab1   562 
  570  C UCW048_F01_BE403761Td06P002D06P022C111F1_005.ab1   193 
Contig length: old 762, new 762

Contig length: old 762, new 762
New start: 0