No. words: 1586; after pruning: 1560


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 15.7 (1,1:798)  748  0.00 0.00 0.13  UCW047_A02_BE403761Td09P002D06P022C111R1_016.ab1       38   793 (31)  C UCW048_A02_BE403761Td09P002D06P022C111F1_016.ab1   (0)   762     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  376 nodes

 190 str. conn. components

Path
    1    UCW047_A02_BE403761Td09P002D06P022C111R1_016.ab1     1 
  650  C UCW048_A02_BE403761Td09P002D06P022C111F1_016.ab1   150 
  754    UCW047_A02_BE403761Td09P002D06P022C111R1_016.ab1   754 
Contig length: old 824, new 824

Contig length: old 824, new 824
New start: 0