No. words: 1512; after pruning: 1486


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.3 (1,1:761)  694  0.14 0.14 0.00  UCW047_B02_BE403761Td10P002D06P022C111R1_014.ab1       60   762 (46)  C UCW048_B02_BE403761Td10P002D06P022C111F1_014.ab1   (0)   704     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1    UCW047_B02_BE403761Td10P002D06P022C111R1_014.ab1     1 
  625  C UCW048_B02_BE403761Td10P002D06P022C111F1_014.ab1   138 
  633    UCW047_B02_BE403761Td10P002D06P022C111R1_014.ab1   633 
  641  C UCW048_B02_BE403761Td10P002D06P022C111F1_014.ab1   122 
  729    UCW047_B02_BE403761Td10P002D06P022C111R1_014.ab1   729 
  741  C UCW048_B02_BE403761Td10P002D06P022C111F1_014.ab1    22 
  745    UCW047_B02_BE403761Td10P002D06P022C111R1_014.ab1   745 
Contig length: old 808, new 808

Contig length: old 808, new 808
New start: 0