No. words: 1741; after pruning: 1715


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:922)  806  0.00 0.12 0.12  UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1       68   885 (0)  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   (0)   856    39 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  400 nodes

 202 str. conn. components

Path
    1    UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1     1 
  298  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   627 
  302    UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1   302 
  394  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   531 
  398    UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1   398 
  402  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   523 
  422    UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1   422 
  426  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   499 
  430    UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1   430 
  462  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   463 
  466    UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1   466 
  482  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   443 
  506    UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1   506 
  510  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   415 
  518    UCW005F_D10_BE403761Tu02P002D06D121F1_078.ab1   518 
  522  C UCW005R_D10_BE403761Tu02P002D06D121R1_078.ab1   403 
Contig length: old 923, new 924

Contig length: old 924, new 924
New start: 0