No. words: 3518; after pruning: 3466


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 16.6 (1,1:855)  818  0.23 0.12 0.12  UCW017F_E10_BE404490As01P014E05P014E111F1_072.ab1        4   856 (20)  C UCW017R_E10_BE404490As01P014E05P014E111R1_072.ab1   (0)   853     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.0 (1,1:860)  840  0.12 0.00 0.00  UCW030F_H03_BE404490As01P014E05P014E111F1_017.ab1        1   861 (40)  C UCW030R_H03_BE404490As01P014E05P014E111R1_017.ab1   (27)   861     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    2

Chimera merges: 


Contig 2:  426 nodes

 215 str. conn. components

Path
    1  C UCW030R_H03_BE404490As01P014E05P014E111R1_017.ab1   888 
   37    UCW030F_H03_BE404490As01P014E05P014E111F1_017.ab1    10 
   45  C UCW030R_H03_BE404490As01P014E05P014E111R1_017.ab1   844 
   58    UCW030F_H03_BE404490As01P014E05P014E111F1_017.ab1    31 
   94  C UCW030R_H03_BE404490As01P014E05P014E111R1_017.ab1   795 
   98    UCW030F_H03_BE404490As01P014E05P014E111F1_017.ab1    71 
  310  C UCW030R_H03_BE404490As01P014E05P014E111R1_017.ab1   579 
  882    UCW030F_H03_BE404490As01P014E05P014E111F1_017.ab1   855 
Contig length: old 928, new 928

Contig 1:  418 nodes

 211 str. conn. components

Path
    1  C UCW017R_E10_BE404490As01P014E05P014E111R1_072.ab1   853 
   13    UCW017F_E10_BE404490As01P014E05P014E111F1_072.ab1    16 
  533  C UCW017R_E10_BE404490As01P014E05P014E111R1_072.ab1   321 
  850    UCW017F_E10_BE404490As01P014E05P014E111F1_072.ab1   853 
Contig length: old 876, new 873

Contig length: old 928, new 928
New start: 0 

Contig length: old 873, new 873
New start: 0