No. words: 3328; after pruning: 3262


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:886)  555  0.67 0.00 0.50  UCW017F_F10_BE404490As02P014E05P014E111F1_070.ab1       49   646 (0)  C UCW017R_F10_BE404490As02P014E05P014E111R1_070.ab1   (0)   837   243 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 19.2 (1,1:892)  868  0.11 0.11 0.00  UCW030F_H04_BE404490As02P014E05P014E111F1_018.ab1        2   892 (19)  C UCW030R_H04_BE404490As02P014E05P014E111R1_018.ab1   (41)   893     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    2

Chimera merges: 


Contig 2:  440 nodes

 222 str. conn. components

Path
    1  C UCW030R_H04_BE404490As02P014E05P014E111R1_018.ab1   934 
   55    UCW030F_H04_BE404490As02P014E05P014E111F1_018.ab1    14 
  655  C UCW030R_H04_BE404490As02P014E05P014E111R1_018.ab1   280 
  910    UCW030F_H04_BE404490As02P014E05P014E111F1_018.ab1   869 
  922  C UCW030R_H04_BE404490As02P014E05P014E111R1_018.ab1    13 
  926    UCW030F_H04_BE404490As02P014E05P014E111F1_018.ab1   885 
Contig length: old 952, new 952

Contig 1:  282 nodes

 143 str. conn. components

Path
    1    UCW017F_F10_BE404490As02P014E05P014E111F1_070.ab1     1 
  313  C UCW017R_F10_BE404490As02P014E05P014E111R1_070.ab1   576 
  317    UCW017F_F10_BE404490As02P014E05P014E111F1_070.ab1   317 
  325  C UCW017R_F10_BE404490As02P014E05P014E111R1_070.ab1   564 
  329    UCW017F_F10_BE404490As02P014E05P014E111F1_070.ab1   329 
  337  C UCW017R_F10_BE404490As02P014E05P014E111R1_070.ab1   552 
Contig length: old 887, new 888

Contig length: old 952, new 952
New start: 0 

Contig length: old 888, new 888
New start: 0