No. words: 1563; after pruning: 1537


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:929)  606  0.63 0.00 0.16  UCW002F_B03_BE404490Ld02P002A06A121F1_025.ab1      146   778 (0)  C UCW002R_B03_BE404490Ld02P002A06A121R1_025.ab1   (0)   785   154 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1    UCW002F_B03_BE404490Ld02P002A06A121F1_025.ab1     1 
  436  C UCW002R_B03_BE404490Ld02P002A06A121R1_025.ab1   495 
  440    UCW002F_B03_BE404490Ld02P002A06A121F1_025.ab1   440 
  468  C UCW002R_B03_BE404490Ld02P002A06A121R1_025.ab1   463 
  472    UCW002F_B03_BE404490Ld02P002A06A121F1_025.ab1   472 
  488  C UCW002R_B03_BE404490Ld02P002A06A121R1_025.ab1   443 
  504    UCW002F_B03_BE404490Ld02P002A06A121F1_025.ab1   504 
  508  C UCW002R_B03_BE404490Ld02P002A06A121R1_025.ab1   423 
  524    UCW002F_B03_BE404490Ld02P002A06A121F1_025.ab1   524 
  532  C UCW002R_B03_BE404490Ld02P002A06A121R1_025.ab1   399 
  581    UCW002F_B03_BE404490Ld02P002A06A121F1_025.ab1   582 
  585  C UCW002R_B03_BE404490Ld02P002A06A121R1_025.ab1   346 
Contig length: old 930, new 930

Contig length: old 930, new 930
New start: 0