No. words: 1564; after pruning: 1524


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:889)  647  0.89 0.00 0.00  UCW017F_F09_BE404490Ld06P014E05P014E111F1_069.ab1       84   757 (0)  C UCW017R_F09_BE404490Ld06P014E05P014E111R1_069.ab1   (0)   807   134 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1    UCW017F_F09_BE404490Ld06P014E05P014E111F1_069.ab1     1 
  297  C UCW017R_F09_BE404490Ld06P014E05P014E111R1_069.ab1   594 
Contig length: old 890, new 890

Contig length: old 890, new 890
New start: 0