No. words: 1591; after pruning: 1551


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:883)  695  0.14 0.00 0.00  UCW017F_A10_BE404490Ld09P014E05P014E111F1_080.ab1       95   801 (0)  C UCW017R_A10_BE404490Ld09P014E05P014E111R1_080.ab1   (0)   790    84 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1    UCW017F_A10_BE404490Ld09P014E05P014E111F1_080.ab1     1 
  294  C UCW017R_A10_BE404490Ld09P014E05P014E111R1_080.ab1   591 
  434    UCW017F_A10_BE404490Ld09P014E05P014E111F1_080.ab1   434 
  438  C UCW017R_A10_BE404490Ld09P014E05P014E111R1_080.ab1   447 
Contig length: old 884, new 884

Contig length: old 884, new 884
New start: 0