No. words: 1405; after pruning: 1379


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:889)  502  0.00 0.00 0.00  UCW017F_B10_BE404490Ld10P014E05P014E111F1_078.ab1      154   668 (0)  C UCW017R_B10_BE404490Ld10P014E05P014E111R1_078.ab1   (0)   737   223 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1    UCW017F_B10_BE404490Ld10P014E05P014E111F1_078.ab1     1 
  505  C UCW017R_B10_BE404490Ld10P014E05P014E111R1_078.ab1   386 
Contig length: old 890, new 890

Contig length: old 890, new 890
New start: 0