No. words: 1745; after pruning: 1719


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:956)  741  0.25 0.00 0.63  UCW002F_A04_BE404490Tu01P002A06A121F1_021.ab1       39   829 (0)  C UCW002R_A04_BE404490Tu01P002A06A121R1_021.ab1   (0)   916   131 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1    UCW002F_A04_BE404490Tu01P002A06A121F1_021.ab1     1 
  527  C UCW002R_A04_BE404490Tu01P002A06A121R1_021.ab1   431 
  531    UCW002F_A04_BE404490Tu01P002A06A121F1_021.ab1   531 
  535  C UCW002R_A04_BE404490Tu01P002A06A121R1_021.ab1   423 
Contig length: old 957, new 957

Contig length: old 957, new 957
New start: 0