No. words: 602; after pruning: 576


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 2.1 (1,1:220)  193  2.29 0.46 0.00  UCW055_C01_BE404894Td03P033A01P002D071F1_011.ab1        4   221 (113)  C UCW056_C01_BE404894Td03P033A01P002D071R1_011.ab1   (49)   219     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  100 nodes

 52 str. conn. components

Path
    1  C UCW056_C01_BE404894Td03P033A01P002D071R1_011.ab1   268 
   53    UCW055_C01_BE404894Td03P033A01P002D071F1_011.ab1     7 
   57  C UCW056_C01_BE404894Td03P033A01P002D071R1_011.ab1   212 
   69    UCW055_C01_BE404894Td03P033A01P002D071F1_011.ab1    22 
Contig length: old 381, new 381

Contig length: old 381, new 381
New start: 0