No. words: 927; after pruning: 901


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.5 (1,1:420)  403  0.00 0.00 0.47  UCW007F_C07_BE406609Ld03P013F01F071F1_059.ab1        1   422 (38)  C UCW007R_C07_BE406609Ld03P013F01F071R1_059.ab1   (47)   420     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C UCW007R_C07_BE406609Ld03P013F01F071R1_059.ab1   467 
  323    UCW007F_C07_BE406609Ld03P013F01F071F1_059.ab1   276 
Contig length: old 506, new 507

Contig length: old 507, new 507
New start: 0