No. words: 949; after pruning: 923


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.1 (1,1:426)  405  0.00 0.23 0.47  UCW007F_C08_BE406609Tu01P013F01F071F1_060.ab1        1   428 (49)  C UCW007R_C08_BE406609Tu01P013F01F071R1_060.ab1   (45)   427     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C UCW007R_C08_BE406609Tu01P013F01F071R1_060.ab1   472 
  317    UCW007F_C08_BE406609Tu01P013F01F071F1_060.ab1   271 
Contig length: old 522, new 523

Contig length: old 523, new 523
New start: 0