No. words: 1249; after pruning: 1209


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 2.0 (1,1:911)  296  1.79 0.90 0.00  UCW007F_F04_BE426080As02P002B06B121F1_022.ab1      494   828 (0)  C UCW007R_F04_BE426080As02P002B06B121R1_022.ab1   (1)   420    83 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  144 nodes

 74 str. conn. components

Path
    1    UCW007F_F04_BE426080As02P002B06B121F1_022.ab1     1 
  582  C UCW007R_F04_BE426080As02P002B06B121R1_022.ab1   332 
  586    UCW007F_F04_BE426080As02P002B06B121F1_022.ab1   586 
  618  C UCW007R_F04_BE426080As02P002B06B121R1_022.ab1   296 
  630    UCW007F_F04_BE426080As02P002B06B121F1_022.ab1   630 
  638  C UCW007R_F04_BE426080As02P002B06B121R1_022.ab1   276 
Contig length: old 912, new 913

Contig length: old 913, new 913
New start: 0