No. words: 1708; after pruning: 1682


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.2 (1,1:843)  798  0.00 0.00 0.00  UCW007F_G04_BE426080At01P002B06B121F1_020.ab1       27   844 (46)  C UCW007R_G04_BE426080At01P002B06B121R1_020.ab1   (0)   818     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  410 nodes

 207 str. conn. components

Path
    1    UCW007F_G04_BE426080At01P002B06B121F1_020.ab1     1 
  514  C UCW007R_G04_BE426080At01P002B06B121R1_020.ab1   331 
  838    UCW007F_G04_BE426080At01P002B06B121F1_020.ab1   838 
Contig length: old 890, new 890

Contig length: old 890, new 890
New start: 0