No. words: 1445; after pruning: 1419


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:852)  560  0.68 0.00 0.00  UCW007F_H04_BE426080At02P002B06B121F1_018.ab1      240   831 (0)  C UCW007R_H04_BE426080At02P002B06B121R1_018.ab1   (0)   614    23 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1    UCW007F_H04_BE426080At02P002B06B121F1_018.ab1     1 
  519  C UCW007R_H04_BE426080At02P002B06B121R1_018.ab1   335 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0