No. words: 1578; after pruning: 1552


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 16.1 (1,1:751)  725  0.13 0.00 0.00  UCW007F_F03_BE426080Ld06P002B06B121F1_021.ab1        7   752 (36)  C UCW007R_F03_BE426080Ld06P002B06B121R1_021.ab1   (44)   746     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C UCW007R_F03_BE426080Ld06P002B06B121R1_021.ab1   790 
   49    UCW007F_F03_BE426080Ld06P002B06B121F1_021.ab1    11 
  584  C UCW007R_F03_BE426080Ld06P002B06B121R1_021.ab1   207 
  784    UCW007F_F03_BE426080Ld06P002B06B121F1_021.ab1   746 
Contig length: old 826, new 826

Contig length: old 826, new 826
New start: 0