No. words: 1594; after pruning: 1568


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.8 (1,1:755)  730  0.00 0.26 0.00  UCW007F_H03_BE426080Ld08P002B06B121F1_017.ab1        1   755 (56)  C UCW007R_H03_BE426080Ld08P002B06B121R1_017.ab1   (26)   757     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1  C UCW007R_H03_BE426080Ld08P002B06B121R1_017.ab1   783 
   42    UCW007F_H03_BE426080Ld08P002B06B121F1_017.ab1    14 
  122  C UCW007R_H03_BE426080Ld08P002B06B121R1_017.ab1   662 
  126    UCW007F_H03_BE426080Ld08P002B06B121F1_017.ab1    98 
  554  C UCW007R_H03_BE426080Ld08P002B06B121R1_017.ab1   230 
  646    UCW007F_H03_BE426080Ld08P002B06B121F1_017.ab1   618 
  650  C UCW007R_H03_BE426080Ld08P002B06B121R1_017.ab1   134 
  658    UCW007F_H03_BE426080Ld08P002B06B121F1_017.ab1   630 
  726  C UCW007R_H03_BE426080Ld08P002B06B121R1_017.ab1    58 
  738    UCW007F_H03_BE426080Ld08P002B06B121F1_017.ab1   710 
  742  C UCW007R_H03_BE426080Ld08P002B06B121R1_017.ab1    42 
  754    UCW007F_H03_BE426080Ld08P002B06B121F1_017.ab1   726 
  758  C UCW007R_H03_BE426080Ld08P002B06B121R1_017.ab1    26 
  770    UCW007F_H03_BE426080Ld08P002B06B121F1_017.ab1   742 
Contig length: old 838, new 839

Contig length: old 839, new 839
New start: 0