No. words: 1422; after pruning: 1396


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:668)  643  0.00 0.00 0.30  UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1        1   670 (35)  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1   (49)   668     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1   717 
   53    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1     4 
   65  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1   653 
   77    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1    28 
   85  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1   633 
   89    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1    40 
  105  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1   613 
  125    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1    76 
  133  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1   585 
  141    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1    92 
  161  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1   557 
  481    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1   432 
  589  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1   129 
  601    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1   552 
  625  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1    93 
  653    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1   604 
  657  C UCW007R_A04_BE426080Ld09P002B06B121R1_032.ab1    61 
  681    UCW007F_A04_BE426080Ld09P002B06B121F1_032.ab1   632 
Contig length: old 753, new 754

Contig length: old 754, new 754
New start: 0