No. words: 852; after pruning: 826


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.2 (1,1:542)  244  0.40 0.00 0.00  UCW059_D05_BE426080Ta12P033C03P002B061R1_041.ab1      295   543 (60)  C UCW060_D05_BE426080Ta12P033C03P002B061F1_041.ab1   (0)   249     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  120 nodes

 62 str. conn. components

Path
    1    UCW059_D05_BE426080Ta12P033C03P002B061R1_041.ab1     1 
Contig length: old 603, new 603

Contig length: old 603, new 603
New start: 0