No. words: 997; after pruning: 971


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 2.5 (1,1:659)  275  0.68 0.34 0.34  UCW059_A09_BE426080Ta17P033D03P002B061R1_079.ab1      367   661 (40)  C UCW060_A09_BE426080Ta17P033D03P002B061F1_079.ab1   (1)   295     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  136 nodes

 70 str. conn. components

Path
    1    UCW059_A09_BE426080Ta17P033D03P002B061R1_079.ab1     1 
Contig length: old 701, new 701

Contig length: old 701, new 701
New start: 0