No. words: 737; after pruning: 711


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.7 (1,1:523)  135  1.91 0.64 0.64  UCW059_F06_BE426080Ta22P033C03P002B061R1_038.ab1      369   525 (55)  C UCW060_F06_BE426080Ta22P033C03P002B061F1_038.ab1   (0)   157     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  60 nodes

 32 str. conn. components

Path
    1    UCW059_F06_BE426080Ta22P033C03P002B061R1_038.ab1     1 
Contig length: old 580, new 580

Contig length: old 580, new 580
New start: 0