No. words: 749; after pruning: 723


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.8 (1,1:499)  152  0.62 0.62 0.00  UCW059_F04_BE426080Td06P033C03P002B061R1_022.ab1      341   500 (88)  C UCW060_F04_BE426080Td06P033C03P002B061F1_022.ab1   (0)   161     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  76 nodes

 40 str. conn. components

Path
    1    UCW059_F04_BE426080Td06P033C03P002B061R1_022.ab1     1 
Contig length: old 588, new 588

Contig length: old 588, new 588
New start: 0