No. words: 1657; after pruning: 1631


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 16.4 (1,1:825)  778  0.00 0.00 0.00  UCW004F_E10_BE442918As02P002B04B101F1_071.ab1       11   826 (11)  C UCW004R_E10_BE442918As02P002B04B101R1_071.ab1   (4)   816     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  410 nodes

 207 str. conn. components

Path
    1    UCW004F_E10_BE442918As02P002B04B101F1_071.ab1     1 
  286  C UCW004R_E10_BE442918As02P002B04B101R1_071.ab1   541 
  290    UCW004F_E10_BE442918As02P002B04B101F1_071.ab1   290 
  338  C UCW004R_E10_BE442918As02P002B04B101R1_071.ab1   489 
  346    UCW004F_E10_BE442918As02P002B04B101F1_071.ab1   346 
  366  C UCW004R_E10_BE442918As02P002B04B101R1_071.ab1   461 
  370    UCW004F_E10_BE442918As02P002B04B101F1_071.ab1   370 
  402  C UCW004R_E10_BE442918As02P002B04B101R1_071.ab1   425 
  490    UCW004F_E10_BE442918As02P002B04B101F1_071.ab1   490 
  498  C UCW004R_E10_BE442918As02P002B04B101R1_071.ab1   329 
  822    UCW004F_E10_BE442918As02P002B04B101F1_071.ab1   822 
Contig length: old 837, new 837

Contig length: old 837, new 837
New start: 0