No. words: 1333; after pruning: 1307


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:629)  612  0.16 0.16 0.00  UCW065_H03_BE443187Sn24P033B06P013F081F1_017.ab1        1   630 (35)  C UCW066_H03_BE443187Sn24P033B06P013F081R1_017.ab1   (37)   631     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C UCW066_H03_BE443187Sn24P033B06P013F081R1_017.ab1   668 
  592    UCW065_H03_BE443187Sn24P033B06P013F081F1_017.ab1   554 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0