No. words: 1349; after pruning: 1323


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:633)  614  0.00 0.16 0.16  UCW065_F02_BE443187Ta14P033B06P013F081F1_006.ab1        1   634 (32)  C UCW066_F02_BE443187Ta14P033B06P013F081R1_006.ab1   (49)   634     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C UCW066_F02_BE443187Ta14P033B06P013F081R1_006.ab1   683 
   84    UCW065_F02_BE443187Ta14P033B06P013F081F1_006.ab1    34 
   92  C UCW066_F02_BE443187Ta14P033B06P013F081R1_006.ab1   592 
  104    UCW065_F02_BE443187Ta14P033B06P013F081F1_006.ab1    54 
  120  C UCW066_F02_BE443187Ta14P033B06P013F081R1_006.ab1   564 
  128    UCW065_F02_BE443187Ta14P033B06P013F081F1_006.ab1    78 
  152  C UCW066_F02_BE443187Ta14P033B06P013F081R1_006.ab1   532 
  168    UCW065_F02_BE443187Ta14P033B06P013F081F1_006.ab1   118 
  200  C UCW066_F02_BE443187Ta14P033B06P013F081R1_006.ab1   484 
  552    UCW065_F02_BE443187Ta14P033B06P013F081F1_006.ab1   502 
Contig length: old 715, new 716

Contig length: old 716, new 716
New start: 0