No. words: 1333; after pruning: 1307


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:634)  615  0.00 0.16 0.16  UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1        1   635 (29)  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1   (34)   635     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1   669 
   98    UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1    63 
  138  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1   532 
  150    UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1   115 
  182  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1   488 
  302    UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1   267 
  334  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1   336 
  562    UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1   527 
  574  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1    96 
  598    UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1   563 
  610  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1    60 
  614    UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1   579 
  622  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1    48 
  634    UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1   599 
  638  C UCW066_D03_BE443187Ta20P033B06P013F081R1_025.ab1    32 
  642    UCW065_D03_BE443187Ta20P033B06P013F081F1_025.ab1   607 
Contig length: old 698, new 699

Contig length: old 699, new 699
New start: 0