No. words: 1352; after pruning: 1326


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.4 (1,1:634)  603  0.32 0.32 0.16  UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1        3   635 (34)  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   (49)   634     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   683 
  133    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1    84 
  137  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   547 
  265    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   216 
  269  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   415 
  285    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   236 
  293  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   391 
  313    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   264 
  321  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   363 
  361    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   312 
  369  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   315 
  373    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   324 
  381  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   303 
  389    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   340 
  393  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   291 
  409    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   360 
  417  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   267 
  549    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   500 
  553  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   131 
  561    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   512 
  577  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1   107 
  585    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   536 
  597  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1    87 
  605    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   556 
  609  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1    75 
  625    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   576 
  637  C UCW066_E03_BE443187Ta21P033B06P013F081R1_023.ab1    47 
  649    UCW065_E03_BE443187Ta21P033B06P013F081F1_023.ab1   600 
Contig length: old 717, new 718

Contig length: old 718, new 718
New start: 0