No. words: 1345; after pruning: 1319


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:633)  614  0.00 0.16 0.16  UCW065_F03_BE443187Ta22P033B06P013F081F1_021.ab1        1   634 (31)  C UCW066_F03_BE443187Ta22P033B06P013F081R1_021.ab1   (46)   634     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C UCW066_F03_BE443187Ta22P033B06P013F081R1_021.ab1   680 
  103    UCW065_F03_BE443187Ta22P033B06P013F081F1_021.ab1    56 
  111  C UCW066_F03_BE443187Ta22P033B06P013F081R1_021.ab1   570 
  115    UCW065_F03_BE443187Ta22P033B06P013F081F1_021.ab1    68 
  119  C UCW066_F03_BE443187Ta22P033B06P013F081R1_021.ab1   562 
  163    UCW065_F03_BE443187Ta22P033B06P013F081F1_021.ab1   116 
  203  C UCW066_F03_BE443187Ta22P033B06P013F081R1_021.ab1   478 
  211    UCW065_F03_BE443187Ta22P033B06P013F081F1_021.ab1   164 
  239  C UCW066_F03_BE443187Ta22P033B06P013F081R1_021.ab1   442 
  575    UCW065_F03_BE443187Ta22P033B06P013F081F1_021.ab1   528 
Contig length: old 711, new 712

Contig length: old 712, new 712
New start: 0