No. words: 1342; after pruning: 1316


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 12.1 (1,1:630)  610  0.00 0.16 0.00  UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1        8   631 (52)  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   (34)   625     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   659 
   46    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1    18 
   50  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   610 
   66    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1    38 
  102  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   558 
  106    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1    78 
  114  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   546 
  118    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1    90 
  126  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   534 
  134    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   106 
  158  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   502 
  162    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   134 
  206  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   454 
  210    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   182 
  314  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   346 
  318    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   290 
  370  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   290 
  374    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   346 
  478  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   182 
  482    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   454 
  518  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   142 
  530    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   502 
  538  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1   122 
  542    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   514 
  614  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1    46 
  618    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   590 
  634  C UCW064_C07_BE443187Td03P033A06P013F081R1_059.ab1    26 
  642    UCW063_C07_BE443187Td03P033A06P013F081F1_059.ab1   614 
Contig length: old 711, new 711

Contig length: old 711, new 711
New start: 0